Differences

This shows you the differences between two versions of the page.

--- research [2019/07/21 10:48]
shyam
+++ research [2019/09/05 12:05]
shyam [Causal discovery from biomedical data]
@@ Line 1: / Line 1: @@
 ~~NOTOC~~
 ===== Research =====
@@ Line 54: / Line 55: @@
 Publications:
+  * Jabbari F, **Visweswaran S**, Cooper GF. {{papers:2018_instance-specific_bayesian_network_structure_learning.pdf|Instance-specific Bayesian network structure learning}}. In: The 9th International Conference on Probabilistic Graphical Models. 2018 Sep 11 – 14.
   * **Visweswaran, S**, Ferreira, A, Cooper, GF. {{papers:2015_personalized_modeling_for_prediction_with_decision-path_models.pdf|Personalized modeling for prediction with decision-path models}}. PLoS One. 2015 Jun 22;10(6):e0131022.
@@ Line 102: / Line 105: @@
   * Strobl, EV, Eack, SM, Swaminathan, V, **Visweswaran, S**. {{papers:2012_predicting_the_risk_of_psychosis_onset_advances_and_prospects.pdf|Predicting the risk of psychosis onset: Advances and prospects. Early Intervention in Psychiatry}}. 2012 Nov;6(4):368-79.
-  * Wei W, **Visweswaran, S**, Cooper, GF. {{papers:2011_the_application_of_naive_bayes_model_averaging_to_predict_alzheimers_disease_from_genome-wide_data.pdf|The application of naive Bayes model averaging to predict Alzheimer's disease from genome-wide data}}. Journal of the American Medical Informatics Association. 2011 Jul-Aug;18(4):370-5.
-  * Jiang, X, Neapolitan, RE, Barmada, MM, **Visweswaran, S**. {{papers:2011_learning_genetic_epistasis_using_bayesian_network_scoring_criteria.pdf|Learning genetic epistasis using Bayesian network scoring criteria}}. BMC Bioinformatics. 2011 Mar 31;12:89.
-  * Jiang, X, Barmada, MM, **Visweswaran, S**. {{papers:2010_identifying_genetic_interactions_in_genome-wide_data_using_bayesian_networks.pdf|Identifying genetic interactions in genome-wide data using Bayesian networks}}. Genetic Epidemiology. 2010 Sep; 34(6):575-81.
@@ Line 116: / Line 114: @@
 Publications:
+  * **Visweswaran S**, Becich MJ, D’Itri VS, Sendro ER, MacFadden D, Anderson NR, Allen KA, Ranganathan D, Murphy SN, Morrato EH, Pincus HA, Toto R, Firestein GS, Nadler LM, Reis SE. [[https://academic.oup.com/jamiaopen/article/1/2/147/5077449|Accrual to Clinical Trials (ACT): A Clinical and Translational Science Award Consortium network]]. JAMIA Open. 2018 Aug 21.
   * Amin, W, Borromeo, C, Saul, M, Becich, MJ, **Visweswaran, S**. {{papers:2015_informatics_synergies_between_path_and_act_networks.pdf|Informatics synergies between PaTH and ACT networks}}. In: Proceedings of the 2015 Summit on Clinical Research Informatics (Mar 2015).
-  * Visweswaran, S, Tenenbaum, J, Gouripeddi, R. Secondary use of data for research - EHR, omics and environmental data. In: AMIA Joint Summits Translational Science Proceedings (Mar 2016).
@@ Line 129: / Line 129: @@
 Publications:
+  * Bhavnani SK, **Visweswaran S**, Divekar R, Brasier A. [[https://journals.sagepub.com/doi/full/10.1177/0021886318794606|Towards team-centered informatics: Accelerating innovation in multidisciplinary scientific teams through visual analytics]]. The Journal of Applied Behavioral Science. 2019 Mar;55(1):50-72.
+  * Bhavnani SK, Dang B, Kilaru V, Caro M, **Visweswaran S**, Saade G, Smith AK, Menon R. [[http://dx.doi.org/10.1515/jpm-2017-0126|Methylation differences reveal heterogeneity in preterm pathophysiology: Results from bipartite network analyses]]. Journal of Perinatal Medicine. 2018 Jul 26;46(5):509-521.
   * Bhavnani, SK, **Visweswaran, S**, Divekar, R, Bellala, G. {{papers:2015_where_is_the_science_in_big_data_visual_analytics_from_pretty_pictures_to_transformative_biomedical_discoveries.pdf|Where is the science in big data visual analytics? From pretty pictures to transformative biomedical discoveries}}. In: AMIA Joint Summits Translational Science Proceedings. 2015 Mar 23; 2015.
@@ Line 138: / Line 142: @@
   * Bhavnani, SK, Dang, B, Caro, M, Bellala, G, **Visweswaran, S**, Asuncion, M, Divekar, R. {{papers:2014_heterogeneity_within_and_across_pediatric_pulmonary_infections_from_bipartite_networks_to_at-risk_subphenotypes.pdf|Heterogeneity within and across pediatric pulmonary infections: From bipartite networks to at-risk subphenotypes}}. In: AMIA Joint Summits Translational Science Proceedings. 2014 Apr 7; 2014:29-34.
-  * Bhavnani, SK, Drake, J, Bellala, G, Dang, B, Peng, B, Oteo, JA, Santibañez-Saenz, P, **Visweswaran, S**, Olano, JP. {{papers:2013_how_cytokines_co-occur_across_rickettsioses_patients_from_bipartite_visual_analytics_to_mechanistic_inferences_of_a_cytokine_storm.pdf|How cytokines co-occur across rickettsioses patients: From bipartite visual analytics to mechanistic inferences of a cytokine storm}}. In: AMIA Joint Summits Translational Science Proceedings. 2013 Mar 18; 2013:15-9.
-  * Bhavnani, SK, Bassler, K, **Visweswaran, S**. [[http://www.google.com/patents/US20130245959|Computer-Implementable Algorithm for Biomarker Discovery Using Bipartite Networks]]. US Patent Application.
-  * Bhavnani, SK, Bellala, G, Victor, S, Bassler, K, **Visweswaran, S**. {{papers:2012_the_role_of_complementary_bipartite_visual_analytical_representations_in_the_analysis_of_snps.pdf|The role of complementary bipartite visual analytical representations in the analysis of SNPs: A case study in ancestral informative markers}}. Journal of the American Medical Informatics Association. 2012 Jun 1; 19(e1):e5-e12.